Bug #1605
Correct library post processing on El Capitan
| Status: | Closed | Start date: | 12/16/2015 | |
|---|---|---|---|---|
| Priority: | Normal | Due date: | ||
| Assigned To: |  Knödlseder Jürgen | % Done: | 0% | |
| Category: | - | |||
| Target version: | - | |||
| Duration: |
Description
Michael Mayer noted the following:
Note that since a few days, when I modify the python interface, I need make clean and a full rebuild to make it run again. Otherwise I get the following error messages (don’t know if this is just a problem on my machine):
Post process module build/gammalib/_app.so error: install_name_tool: for: build/gammalib/_app.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/lib" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/lib error: install_name_tool: for: build/gammalib/_app.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/src/.libs" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/src/.libs Post process module build/gammalib/_base.so error: install_name_tool: for: build/gammalib/_base.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/lib" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/lib error: install_name_tool: for: build/gammalib/_base.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/src/.libs" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/src/.libs Post process module build/gammalib/_com.so error: install_name_tool: for: build/gammalib/_com.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/lib" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/lib error: install_name_tool: for: build/gammalib/_com.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/src/.libs" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/src/.libs Post process module build/gammalib/_cta.so Post process module build/gammalib/_fits.so error: install_name_tool: for: build/gammalib/_fits.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/lib" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/lib error: install_name_tool: for: build/gammalib/_fits.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/src/.libs" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/src/.libs Post process module build/gammalib/_lat.so error: install_name_tool: for: build/gammalib/_lat.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/lib" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/lib error: install_name_tool: for: build/gammalib/_lat.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/src/.libs" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/src/.libs Post process module build/gammalib/_linalg.so error: install_name_tool: for: build/gammalib/_linalg.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/lib" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/lib error: install_name_tool: for: build/gammalib/_linalg.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/src/.libs" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/src/.libs Post process module build/gammalib/_model.so error: install_name_tool: for: build/gammalib/_model.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/lib" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/lib error: install_name_tool: for: build/gammalib/_model.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/src/.libs" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/src/.libs Post process module build/gammalib/_mwl.so error: install_name_tool: for: build/gammalib/_mwl.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/lib" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/lib error: install_name_tool: for: build/gammalib/_mwl.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/src/.libs" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/src/.libs Post process module build/gammalib/_numerics.so error: install_name_tool: for: build/gammalib/_numerics.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/lib" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/lib error: install_name_tool: for: build/gammalib/_numerics.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/src/.libs" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/src/.libs Post process module build/gammalib/_obs.so error: install_name_tool: for: build/gammalib/_obs.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/lib" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/lib error: install_name_tool: for: build/gammalib/_obs.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/src/.libs" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/src/.libs Post process module build/gammalib/_opt.so error: install_name_tool: for: build/gammalib/_opt.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/lib" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/lib error: install_name_tool: for: build/gammalib/_opt.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/src/.libs" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/src/.libs Post process module build/gammalib/_sky.so error: install_name_tool: for: build/gammalib/_sky.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/lib" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/lib error: install_name_tool: for: build/gammalib/_sky.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/src/.libs" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/src/.libs Post process module build/gammalib/_support.so error: install_name_tool: for: build/gammalib/_support.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/lib" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/lib error: install_name_tool: for: build/gammalib/_support.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/src/.libs" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/src/.libs Post process module build/gammalib/_test.so error: install_name_tool: for: build/gammalib/_test.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/lib" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/lib error: install_name_tool: for: build/gammalib/_test.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/src/.libs" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/src/.libs Post process module build/gammalib/_vo.so error: install_name_tool: for: build/gammalib/_vo.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/lib" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/lib error: install_name_tool: for: build/gammalib/_vo.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/src/.libs" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/src/.libs Post process module build/gammalib/_xml.so error: install_name_tool: for: build/gammalib/_xml.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/lib" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/lib error: install_name_tool: for: build/gammalib/_xml.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/src/.libs" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/src/.libs Post process module build/gammalib/_xspec.so error: install_name_tool: for: build/gammalib/_xspec.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/lib" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/lib error: install_name_tool: for: build/gammalib/_xspec.so (for architecture x86_64) option "-add_rpath /Users/mimayer/Software/gammalib/src/.libs" would duplicate path, file already has LC_RPATH for: /Users/mimayer/Software/gammalib/src/.libs make[2]: *** [build] Error 1 make[1]: *** [install] Error 2 make: *** [install-recursive] Error 1
The probable cause is the post processing introduced for El Capitan. If the post processing is applied to a library that has already been post processed, the errors should occur.
Recurrence
No recurrence.
History
#1
Updated by Knödlseder Jürgen almost 9 years ago
Note that otool -l can be used to check whether a load path exists:
$ otool -l src/.libs/libgamma.dylib | grep "path test"
path test (offset 12)
Furthermore, we can test whether an output is empty or not using:
$ if [[ $(otool -l src/.libs/libgamma.dylib | grep "path test") ]]; then echo "yes"; else echo "no"; fi
#2
Updated by Knödlseder Jürgen almost 9 years ago
- Status changed from New to Feedback
See also https://www.gnu.org/software/make/manual/html_node/Errors.html for a nice way to simply ignore errors.
I implemented this and pushed into devel. You still get the verbose output, but it should no longer lead to an error. Tell me Michael if this works for you.
#3
Updated by Mayer Michael almost 9 years ago
- Status changed from Feedback to Resolved
Thanks, it now works. I don’t get errors any more when updating the python interface.
#4
Updated by Knödlseder Jürgen almost 9 years ago
- Status changed from Resolved to Closed