Action #3629

Update conda environment

Added by Knödlseder Jürgen about 1 year ago. Updated 28 days ago.

Status:ClosedStart date:04/29/2021
Priority:NormalDue date:
Assigned To:Knödlseder Jürgen% Done:

100%

Category:-
Target version:2.0.0
Duration:

Description

Before release 2.0 the conda environment should be updated. This includes updating the dependencies, since Python 3.9 does not support readline 7.0. Furthermore, the re-activation step after installing the package does not seem to be needed anymore. This should be verified. Eventually the conda version should be determined from which one this step is no longer needed.


Recurrence

No recurrence.

History

#1 Updated by Knödlseder Jürgen 28 days ago

  • Project changed from ctools to GammaLib
  • Assigned To set to Knödlseder Jürgen
  • Target version changed from 2.0.0 to 2.0.0

This action seems more to relate to gammalib than ctools. The actual code supports already building for Python 3.9, the current Python version 3.10 should be added.

#2 Updated by Knödlseder Jürgen 28 days ago

  • % Done changed from 0 to 10

I first tried building GammaLib for Python 3.9 on my Mac:

$ anaconda
$ conda build dev/conda.recipe --python=3.9
No numpy version specified in conda_build_config.yaml.  Falling back to default numpy value of 1.16
WARNING:conda_build.metadata:No numpy version specified in conda_build_config.yaml.  Falling back to default numpy value of 1.16
Adding in variants from internal_defaults
INFO:conda_build.variants:Adding in variants from internal_defaults
Adding in variants from /Users/jurgen/git/gammalib/gammalib/dev/conda.recipe/conda_build_config.yaml
INFO:conda_build.variants:Adding in variants from /Users/jurgen/git/gammalib/gammalib/dev/conda.recipe/conda_build_config.yaml
Adding in variants from config.variant
INFO:conda_build.variants:Adding in variants from config.variant
Attempting to finalize metadata for gammalib
INFO:conda_build.metadata:Attempting to finalize metadata for gammalib
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
BUILD START: ['gammalib-2.0.0.dev-py39_1.tar.bz2']
Collecting package metadata (repodata.json): ...working... 
Solving environment: ...working... done
Collecting package metadata (repodata.json): ...working... 
Solving environment: ...working... done

## Package Plan ##

  environment location: /Users/jurgen/anaconda3/conda-bld/gammalib_1654369742112/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_p

The following NEW packages will be INSTALLED:

    bzip2:           1.0.8-h0d85af4_4          conda-forge
    c-ares:          1.18.1-h0d85af4_0         conda-forge
    ca-certificates: 2022.5.18.1-h033912b_0    conda-forge
    cfitsio:         3.430-h50cca31_1002       conda-forge
    curl:            7.83.1-h23f1065_0         conda-forge
    krb5:            1.19.3-hb98e516_0         conda-forge
    libcurl:         7.83.1-h23f1065_0         conda-forge
    libcxx:          14.0.4-hc203e6f_0         conda-forge
    libedit:         3.1.20191231-h0678c8f_2   conda-forge
    libev:           4.33-haf1e3a3_1           conda-forge
    libffi:          3.4.2-h0d85af4_5          conda-forge
    libgfortran:     3.0.1-0                   conda-forge
    libnghttp2:      1.47.0-hca56917_0         conda-forge
    libssh2:         1.10.0-hd3787cc_2         conda-forge
    libzlib:         1.2.12-h6c3fc93_0         conda-forge
    ncurses:         6.3-h96cf925_1            conda-forge
    openssl:         3.0.3-hfe4f2af_0          conda-forge
    pcre:            8.45-he49afe7_0           conda-forge
    pip:             22.1.2-pyhd8ed1ab_0       conda-forge
    python:          3.9.13-hf8d34f4_0_cpython conda-forge
    python_abi:      3.9-2_cp39                conda-forge
    readline:        8.1-h05e3726_0            conda-forge
    setuptools:      62.3.2-py39h6e9494a_0     conda-forge
    sqlite:          3.38.5-hd9f0692_0         conda-forge
    swig:            4.0.2-hce5123c_2          conda-forge
    tk:              8.6.12-h5dbffcc_0         conda-forge
    tzdata:          2022a-h191b570_0          conda-forge
    wheel:           0.37.1-pyhd8ed1ab_0       conda-forge
    xz:              5.2.5-haf1e3a3_1          conda-forge
    zlib:            1.2.12-h6c3fc93_0         conda-forge

Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
Source cache directory is: /Users/jurgen/anaconda3/conda-bld/src_cache
INFO:conda_build.source:Source cache directory is: /Users/jurgen/anaconda3/conda-bld/src_cache
INFO conda_build.source:download_to_cache(44): Source cache directory is: /Users/jurgen/anaconda3/conda-bld/src_cache
No hash (md5, sha1, sha256) provided for gammalib-2.0.0.dev.tar.gz.  Source download forced.  Add hash to recipe to use source cache.
WARNING:conda_build.source:No hash (md5, sha1, sha256) provided for gammalib-2.0.0.dev.tar.gz.  Source download forced.  Add hash to recipe to use source cache.
WARNING conda_build.source:download_to_cache(61): No hash (md5, sha1, sha256) provided for gammalib-2.0.0.dev.tar.gz.  Source download forced.  Add hash to recipe to use source cache.
Downloading source to cache: gammalib-2.0.0.dev.tar.gz
INFO:conda_build.source:Downloading source to cache: gammalib-2.0.0.dev.tar.gz
INFO conda_build.source:download_to_cache(69): Downloading source to cache: gammalib-2.0.0.dev.tar.gz
Downloading http://cta.irap.omp.eu/ctools/releases/gammalib/gammalib-2.0.0.dev.tar.gz
INFO:conda_build.source:Downloading http://cta.irap.omp.eu/ctools/releases/gammalib/gammalib-2.0.0.dev.tar.gz
INFO conda_build.source:download_to_cache(83): Downloading http://cta.irap.omp.eu/ctools/releases/gammalib/gammalib-2.0.0.dev.tar.gz
Success
INFO:conda_build.source:Success
INFO conda_build.source:download_to_cache(94): Success
Extracting download
source tree in: /Users/jurgen/anaconda3/conda-bld/gammalib_1654369742112/work
export PREFIX=/Users/jurgen/anaconda3/conda-bld/gammalib_1654369742112/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_p
export SRC_DIR=/Users/jurgen/anaconda3/conda-bld/gammalib_1654369742112/work
...
... (compiling) ...
...
####################################################################################
Resource usage summary:

Total time: 0:18:43.0
CPU usage: sys=0:00:09.0, user=0:03:12.5
Maximum memory usage observed: 416.3M
Total disk usage observed (not including envs): 557.6K

Following the build I tested the conda build:
$ conda create -n gammalib-devel-test python=3.9
$ conda activate gammalib-devel-test
$ conda install --use-local gammalib=2.0.0.dev
$ python
Python 3.9.13 | packaged by conda-forge | (main, May 27 2022, 17:01:00) 
[Clang 13.0.1 ] on darwin
Type "help", "copyright", "credits" or "license" for more information.
>>> import gammalib
>>>
This worked successfully.

#3 Updated by Knödlseder Jürgen 28 days ago

  • Status changed from New to Pull request
  • % Done changed from 10 to 90

I repeated the check for Python 3.10, and did similar tests for ctools. All worked out fine.

#4 Updated by Knödlseder Jürgen 28 days ago

  • Status changed from Pull request to Closed
  • % Done changed from 90 to 100

Merged into devel.

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